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All Papers
| All E. scolopes/V. fischeri papers in order of publication date. |
 Primary Article .  Review Article .  Book Sections |
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Wang, Y and EG Ruby. 2011. The roles of NO in microbial symbioses. Cellul Microbiol, online ahead of publication (doi:10.1111/j.1462-5822.2011.01576.x)
Dunn, AK, EA Karr, Y Wang, AR Batton, EG Ruby and EV Stabb. 2010. The alternate oxidase (AOX) gene in Vibrio fischeri is controlled by NsrR and upregulated in response to nitric oxide. Mol Microbiol 77:44-55.
McFall-Ngai, M. J., S. Nyholm, M. Castillo. 2010. The Role of the Immune System in the Initiation and Persistence of the Euprymna Scolopes-Vibrio Fischeri Symbiosis. Seminars in Immunology, 22(1):48-53.
Miyashiro, T, MS Wollenberg, X Cao, D Oehlert and EG Ruby. 2010. A single qrr gene is necessary and sufficient for LuxO-mediated regulation in Vibrio fischeri. Mol Microbiol 77:1556-1567.
Pollack-Berti, A, MS Wollenberg and EG Ruby. 2010. Natural transformation of Vibrio fischeri requires tfoX and tfoY. Environ Microbiol. 12:2302-2311.
Wang, Y., Y. S. Dufourb, H. K. Carlsonc, T. J. Donohueb, M. A. Marlettac, and E. G. Ruby. 2010. H-NOX-mediated nitric oxide sensing modulates symbiotic colonization by Vibrio fischeri. Proceedings of the National Academy of Sciences of the United States of America, 107(18):8375-8380.
Wang, Y, AK Dunn, J Wycoff, MJ McFall-Ngai, S Spiro and EG Ruby. 2010. Vibrio fischeri flavohaemoglobin protects against nitric oxide during Initiation of the squid-Vibrio symbiosis. Mol Microbiol. 78:903-915.
Wier, A. M., S. V. Nyholm, M. J. Mandel, R. P. Massengo-Tiasse, A .L. Schaefer, I. Koroleva, S. Splinter-BonDurant, B. Brown, L. Manzella, E. Snir, H. Almabrazi, T. E. Scheetz, M. D. Bonaldo, T. L. Casavant, M. B. Soares, J. E. Cronan, J. L. Reed, E. G. Ruby, M. J. McFall-Ngai. 2010. Transcriptional Patterns in Both Host and Bacterium Underlie a Daily Rhythm of Anatomical and Metabolic Change in a Beneficial Symbiosis. Proceedings of the National Academy of Sciences of the United States of America, 107(5):2259-2264.
Adin, D. M., J. T. Engle, W. E. Goldman, M. J. McFall-Ngai, E. V. Stabb. 2009. Mutations in AmpG and Lytic Transglycosylase Genes Affect the Net Release of Peptidoglycan Monomers from Vibrio Fischeri. Journal of Bacteriology, 191(7):2012.
Castillo, M. G., M. S. Goodson, M. J. McFall-Ngai. 2009. Identification and molecular characterization of a complement-C3 molecule in a lophotrochozoan, the Hawaiian bobtail squid Eupyrmna scolopes. Dev. Comp. Immunol., 33:669-76.
Handelsman, J., M. J. McFall-Ngai. 2009. Microbial Symbiosis: In Sickness and in Health. Dna and Cell Biology, 28(8):359-360.
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009. The Hawaiian bobtail squid (Euprymna scolopes): a model to study the molecular basis of eukaryote-prokaryote mutualism and the development and evolution of morphological novelties in cephalopods. Cold Spring Harb Protoc., 2009 Nov 2009(11).
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009. Preparation of genomic DNA from Hawaiian bobtail squid (Euprymna scolopes) tissue by cesium chloride gradient centrifugation. Cold Spring Harb Protoc., 2009 Nov 2009(11).
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009. The Embryonic Development of the Hawaiian Bobtail Squid (Euprymna scolopes). Cold Spring Harb Protoc., 2009 Nov 2009(11).
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009. Confocal immunocytochemistry of embryonic and juvenile Hawaiian bobtail squid (Euprymna scolopes) tissues. Cold Spring Harb Protoc., 2009 Nov 2009(11).
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009. Whole-mount in situ hybridization of Hawaiian bobtail squid (Euprymna scolopes) embryos with DIG-labeled riboprobes: I. DNA template preparation and in vitro transcription of riboprobes. Cold Spring Harb Protoc., 2009 Nov 2009(11).
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009.Whole-mount in situ hybridization of Hawaiian bobtail squid (Euprymna scolopes) embryos with DIG-labeled riboprobes: II. Embryo preparation, hybridization, washes, and immunohistochemistry. Cold Spring Harb Protoc., 2009 Nov 2009(11).
Lee, P. N., M. J. McFall-Ngai, P. Callaerts, H. G. de Couet. 2009. Culture of Hawaiian Bobtail Squid (Euprymna scolopes) Embryos and Observation of Normal Development. Cold Spring Harb Protoc., 2009 Nov 2009(11).
Mandel, M. J., M. S. Wollenberg, E. V. Stabb, K. L. Visick, E. G. Ruby. 2009. A single regulatory gene is sufficient to alter symbiosis host range. Nature, 458:215-218.
Nyholm, S. V., J. J. Stewart, E. G. Ruby, M. J. McFall-Ngai. 2009. Recognition between symbiotic Vibrio fischeri and the hemocytes of Euprymna scolopes. Environ. Microbiol., 11:483-493.
Tong, D., N. S. Rozas, T. H. Oakley, J. Mitchell, N. J. Colley, M. J. McFall-Ngai. 2009. Evidence for Light Perception in a Bioluminescent Organ. Proceedings of the National Academy of Sciences of the United States of America, 106(24):9836-9841.
Troll, J. V., D. M. Adin, A. M. Wier, N. Paquette, N. Silverman, W. E. Goldman, F. J. Stadermann, E. V. Stabb, M. J. McFall-Ngai. (2009). Peptidoglycan induces loss of a nuclear peptidoglycan recognition protein during host tissue development in a beneficial animal-bacterial symbiosis. Cellular Microbiology, 11:1114-1127.
Troll, J. V., E. H. Bent, N. Pacquette, A. M. Wier, W. E. Goldman, N. Silverman, M. J. McFall-Ngai. 2009. Taming the Symbiont for Coexistence: A Host PGRP Neutralizes a Bacterial Symbiont Toxin. Environ Microbiol.
Wollenberg, M. S., E. G. Ruby. 2009. Population Structure of Vibrio fischeri within the Light Organs of Euprymna scolopes Squid from Two Oahu (Hawaii) Populations. Appl. Environ. Microbiol., 75:193-202.
Adin, D. M., N. J. Phillips, B. W. Gibson, M. A. Apicella, E. G. Ruby, M. J. McFall-Ngai, D. B. Hall, E.V. Stabb. 2008. Characterization of htrB and msbB mutants of the light organ symbiont Vibrio fischeri. Appl. Environ. Microbiol, 74:633-44.
Chun, C. K., J. V. Troll, I. Koroleva, B. Brown, L. Manzella, E. Snir, H. Almabrazi, T. E. Scheetz, M. Bonaldo, T. L. Casavant, M. B. Soares, E. G. Ruby, M. J. McFall-Ngai. 2008. Effects of colonization, luminescence and autoinducer on global host transcription in the developing squid-vibrio symbiosis. Proc. Natl. Acad. Sci. USA 105:11323-11328.
Mandel, M. J., E. V. Stabb, E. G. Ruby. 2008. Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artifactual expansions. BMC Genomics, 9:138.
McFall-Ngai, M. J. 2008. Quick Guide: The Hawaiian Bobtail Squid. Curr. Biol. 18: R1043-R1044.
McFall-Ngai, M. J. 2008. Are Biologists in 'Future Shock'? Symbiosis integrates biology across Domains. Nat. Rev. Microbiol. 6:789-792.
Ruby, E. G. 2008. Symbiotic conversations are revealed under genetic interrogation. Nat. Rev. Microbiol., 6:752-762.
Studer, S. V., M. J. Mandel, E. G. Ruby. 2008. AinS quorum sensing regulates the Vibrio fischeri acetate switch. J. Bacteriol., 190:5915-5923.
Antunes, L. C., A. L. Schaefer, R. B. Ferreira, N. Qin, A. M. Stevens, E. G. Ruby, E. P. Greenberg. 2007. Transcriptome analysis of the Vibrio fischeri LuxR-LuxI regulon. J. Bacteriol., 189:8387-8391.
Dethlefsen, L., M. J. McFall-Ngai, D. A. Relman 2007. An ecological and evolutionary perspective on human-microbe mutualism and disease. Invited Insight Nature, 449:811-818.
Dunlap, P. V., Ast, J. C., Kimura, S., Fukui, A., Yoshino, T., H. Endo. 2007. Phylogenetic analysis of host-symbiont specificity and codivergence in bioluminescent symbioses. Cladistics, 23:507-532.
Guerrero-Ferreira, R. C. and M. K. Nishiguchi. 2007. Biodiversity among luminescent symbionts from squid of the genera Uroteuthis, Loliolus and Euprymna (Mollusca: Cephalopoda). Cladistics, 23:497-506.
Hussa, E. A., T. M. O'Shea, C. L. Darnell, E. G. Ruby, K. L. Visick. 2007. Two-component response regulators of Vibrio fischeri: identification, mutagenesis, and characterization. J. Bacteriol., 189:5825-5838.
Jones, B. W., Maruyama, A., Ouverney, C. C., M. K. Nishiguchi. 2007. Spatial and temporal distribution of the Vibrionaceae in coastal waters of Hawaii, Australia, and France. Microb. Ecol., 54:314-323.
Koropatnick, T. A., J. R. Kimbell, M. J. McFall-Ngai. 2007. Responses of Host Hemocytes During the Initiation of the Squid-Vibrio Symbiosis. Biol. Bull, 212:29-39.
McFall-Ngai, M. J. 2007. Care for the community: A memory-based immune system may have evolved in vertebrates because of the need to recognize and manage complex communities of beneficial microbes. Commissioned "Concept" paper, Nature, 445:153.
McFall-Ngai, M. J. 2007. The squid-vibrio association: A naturally occurring experimental model of animal-bacterial partnerships. GI Microbiota and Regulation of the Immune System. G Huffnagle and M Noverr, eds. Landes Bioscience Press, Austin, TX.
McFall-Ngai, M. J., V. de Lorenzo. 2007. The ultimate rendezvous: microbial ecology meets industrial microbiology. Curr. Opin. Microbiol, 10:205-206.
Nelson, E. J., H. S. Tunsjø, P. M. Fidopiastis, H. Sørum, E. G. Ruby. 2007. A novel lux operon in the cryptically bioluminescent fish pathogen Vibrio salmonicida is associated with virulence. Appl. Environ. Microbiol., 73:1825-1833.
Stabb, E. V., A. Schaefer, J. Bose, E. G. Ruby. 2007. Quorum signaling and symbiosis in the marine luminous bacterium Vibrio fischeri. Chemical Communication among Bacteria. SC Winans and B Bassler, eds. pp. 233-250, ASM Press, Washington, DC.
Urbanczyk, H., Ast, J. C., Higgins, M. J., Carson, J., P. V. Dunlap. 2007. Reclassification of Vibrio fischeri, Vibrio logei, Vibrio salmonicida and Vibrio wodanis as Aliivibrio fischeri gen. nov., comb. nov., Aliivibrio logei comb. nov., Aliivibrio salmonicida comb. nov. and Aliivibrio wodanis comb. nov. Int. J. Syst. Evol. Microbiol., 57:2823-2829.
Whistler, C. A., T. A. Koropatnick, A. Pollack, M. J. McFall-Ngai, E. G. Ruby. 2007. The GacA global regulator of Vibrio fischeri is required for normal host tissue responses that limit subsequent bacterial colonization. Cellul. Microbiol., 9:766-778.
Chun, C. K., T. E. Scheetz, M. de Fatima Bonaldo, B. Brown, A. Clemens, W. J. Crookes-Goodson, K. Crouch, T. DeMartini, M. Eyestone, M. S. Goodson, B. Janssens, J. L Kimbell, T. A. Koropatnick, T. Kucaba, C. Smith, J. J. Stewart, D. Tong, J. V. Troll, S. Webster, J. Winhall-Rice, C. Yap, T. L. Casavant, M. J. McFall-Ngai, M. B. Soares. 2006. An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri. BMC Genomics, 7:154.
Cloud-Hansen, K. A., S. B. Peterson, E. V. Stabb, W. E. Goldman, M. J. McFall-Ngai, J. Handelsman. 2006. Breaching the great wall: peptidoglycan and microbial interactions. Nat. Rev. Microbiol, 4:710-6.
Goodson, M. S., W. J. Crookes-Goodson, J. R. Kimbell, M. J. McFall-Ngai. 2006. Characterization and Role of p53 Family Members in the Symbiont-Induced Morphogenesis of the Euprymna scolopes Light Organ. Biol. Bull, 211:7-17.
Jones, B. W., Lopez, J. E., Huttenburg, J. and M. K. Nishiguchi. Population structure between environmentally transmitted vibrios and bobtail squids using nested clade analysi. 2006. Mol. Ecol., 15:4317-4329.
Kimbell, J. R., T. A. Koropatnick, M. J. McFall-Ngai. 2006. Evidence for the Participation of the Proteasome in Symbiont-Induced Tissue Morphogenesis. Biol. Bull, 211:1-6.
McFall-Ngai, M. J. 2006. Love the One You’re with: Vertebrate Guts Shape Their Microbiota. Cell, 127(2):247-249.
Reen, F. J., S. Almagro-Moreno, D. Ussery, E. F. Boyd. 2006. The genomic code: Inferring Vibrionaceae niche specialization. Nat. Rev. Micro., 4:697-704.
Sycuro, L. K., E. G. Ruby, M. J. McFall-Ngai. 2006. Confocal microscopy of the light organ crypts in juvenile Euprymna scolopes reveals their morphological complexity and dynamic function in symbiosis. J. Morphol., 267:555-568.
Visick, K. L., E. G. Ruby. 2006. Vibrio fischeri and its host: it takes two to tango. Curr. Opin. Microbiol., 9:632-638.
Walker, E. L., Bose, J. G., E. V. Stabb. 2006. Photolyase confers resistance to UV light but does not contribute to the symbiotic benefit of bioluminescence in Vibrio fischeri ES114. Appl. Environ. Microbiol., 72:6600-6606.
Dunn, A. K., M. O. Martin, E. Stabb. 2005. Characterization of pES213, a small mobilizable plasmid from V. fischeri. Plasmid, 54:114-134.
Lupp, C., E. G. Ruby. 2005. Vibrio fischeri Uses Two Quorum-Sensing Systems for the Regulation of Early and Late Colonization Factors. J. Bacteriol., 187(11):3620-3629.
Galperin, M. Y. 2005. The vibrio that sheds light. Environmental Microbiology, 7(6):757–760.
Goodson, M. S., M. Kojadinovic, J. V. Troll, T. E. Scheetz, T. L. Casavant, M. B. Soares, M. J. McFall-Ngai. 2005. Identifying Components of the NF- B Pathway in the Beneficial Euprymna scolopes-Vibrio fischeri Light Organ Symbiosis. Appl Environ Microbiol, 71(11):6934–6946.
McFall-Ngai, M. J., J. I. Gordon. 2005. Experimental models of symbiotic host-microbial relationships: understanding the underpinnings of beneficence and the origins of pathogenesis. The Evolution of Bacterial Pathogens. H Seifert and V DiRita, eds., ASM Press, Washington, DC.
McFall-Ngai, M. J., B. Henderson, E. G. Ruby. 2005. The Influence of Cooperative Bacteria on Animal Host Biology. Cambridge University Press, Cambridge.
Ruby, E. G., M. Urbanowski, J. Campbell, A. Dunn, M. Faini, R. Gunsalus, P. Lostroh, C. Lupp, J. McCann, D. Millikan, A. Schaefer, E. Stabb, A. Stevens, K. Visick, C. Whistler, E.P. Greenberg. 2005. Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. PNAS USA, 102:3004-09.
Stabb, E. V. 2005. Shedding Light on the Bioluminescence “Paradox”. ASM News, 71:223-229.
Thompson, F. L., Gevers, D., Thompson, C. C., Dawyndt, P., Naser, S., Hoste, B., Munn, C. B., J. Swings. 2005. Phylogeny and molecular identification of Vibrios based on multilocus sequence analysis. Appl. Environ. Microbiol., 71:5107-5115.
Crookes, W. J., L. L. Ding, Q. L. Huang, J. R. Kimbell, J. Horwitz, M. J. McFall-Ngai. 2004. Reflectins: the unusual proteins of squid reflective tissues. Science, 303(5655), 235-238.
Davidson, S. K., T. A. Koropatnick, R. Kossmehl, L. Sycuro, M. J. McFall-Ngai. 2004. NO means ‘yes’ in the squid-vibrio symbiosis: nitric oxide (NO) during the initial stages of a beneficial association. Cell Microbiol., 6(12):1139-51.
Jones, B. W. and M. K. Nishiguchi. 2004. Counterillumination in the Hawaiian bobtail squid, Euprymna scolopes (Mollusca: Cephalopoda). Mar. Biol., 144:1151-1155.
Kimbell J.R., M. J. McFall-Ngai. 2004. Symbiont-Induced Changes in Host Actin during the Onset of a Beneficial Animal-Bacterial Association. Appl. Environ. Microbiol., 70(3):1434-41.
Koropatnick, T. A., J. T. Engle, M. A. Apicella, E. V. Stabb, W. E. Goldman, M. J. McFall-Ngai. 2004. Microbial Factor-Mediated Development in a Host-Bacterial Mutualism. Science, 306(5699):1186-8.
Lindgren, A. R., G. Giribet, M. K. Nishiguchi. 2004. A combined approach to the phylogeny of Cephalopoda (Mollusca). Cladistics, 20:454–486.
Lupp, C., E. G. Ruby. 2004. Vibrio fischeri LuxS and AinS: Comparative Study of Two Signal Synthases. J. Bacteriol., 186(12):3873-81.
Millikan, D. S., E. G. Ruby. 2004. Vibrio fischeri Flagellin A Is Essential for Normal Motility and for Symbiotic Competence during Initial Squid Light Organ Colonization. J Bacteriol., 186(13):4315-25.
Nishiguchi, M. K., Lopez, J. E. and S. V. Boletzky. 2004. Enlightenment of old ideas from new investigations: more questions regarding the evolution of bacteriogenic light organs in squids. Evol. Develop., 6:41-49.
Nyholm, S. V., M. J. McFall-Ngai. 2004. The Winnowing: Establishing the Squid–Vibrio Symbiosis. Nat. Rev. Microbiol., 2(8):632-42.
Thompson, F. L., Iida, T., J. Swings. 2004. Biodiversity of Vibrios. Microbiol. Mol. Biol. Rev., 68:403-431.
Ruby, E. G., B. Henderson, M. J. McFall-Ngai. 2004. We Get By with a Little Help from Our (Little) Friends. Science, 303:1305-1307.
DeLoney-Marino, C.R., A. J. Wolfe, K. L. Visick. 2003. Chemoattraction of Vibrio fischeri to serine, nucleosides, and N-acetylneuraminic acid, a component of squid light-organ mucus. Appl. Environ. Microbiol., 69(12):7527-30.
Hartmann, B., P. N. Lee, Y. Y. Kang, S. Tomarev, H. G. de Couet, P. Callaerts. 2003. Pax6 in the sepiolid squid Euprymna scolopes: evidence for a role in eye, sensory organ and brain development. Mech. Dev., 120(2):177-83.
Kimbell, J. R., M. J. McFall-Ngai. 2003. The Squid-Vibrio Symbioses: From Demes to Genes. Integr. Comp. Biol., 43, 254-260.
Lee, P. N., P. Callaerts, H. G. De Couet, H. G. Martindale. 2003. Cephalopod Hox genes and the origin of morphological novelties. Nature, 424(6952):1061-5.
Lupp, C., M. Urbanowski, E. P. Greenberg, E. G. Ruby. 2003. The Vibrio fischeri quorum-sensing systems ain and lux sequentially induce luminescence gene expression and are important for persistence in the squid host. Mol. Microbiol., 50(1):319-331.
McCann, J., E. V. Stabb, D. S. Millikan, E. G. Ruby. 2003. Population dynamics of Vibrio fischeri during infection of Euprymna scolopes. Appl. Environ. Microbiol., 69(10), 5928-5934.
Millikan, D. S., E. G. Ruby. 2003. FlrA, a sigma54-dependent transcriptional activator in Vibrio fischeri, is required for motility and symbiotic light-organ colonization. J. Bacteriol., 185(12), 3547-3557.
Miyamoto, C. M., P. V. Dunlap, E. G. Ruby, E. A. Meighen. 2003. LuxO controls luxR expression in Vibrio harveyi: evidence for a common regulatory mechanism in Vibrio. Mol. Microbiol., 48(2), 537-548.
Nishiguchi, M. K. and V. S. Nair. 2003. Evolution of symbiosis in the Vibrionaceae: a combined approach using molecules and physiology. Int. J. Syst. Evol. Microbiol., 53:2019-2026.
Nyholm, S. V., M. J. McFall-Ngai. 2003. Dominance of Vibrio fischeri in secreted mucus outside the light organ of Euprymna scolopes: the first site of symbiont specificity. Appl. Environ. Microbiol., 69(7), 3932-3937.
Stabb, E. V., E. G. Ruby. 2003. Contribution of pilA to competitive colonization of the squid Euprymna scolopes by Vibrio fischeri. Appl. Environ. Microbiol., 69(2), 820-826.
Whistler, C. A., E. G. Ruby. 2003. GacA regulates symbiotic colonization traits of Vibrio fischeri and facilitates a beneficial association with an animal host. J. Bacteriol., 185(24), 7202-7212.
Callaerts, P., P. N. Lee, B. Hartmann, C. Farfan, D. W. Choy, K. Ikeo, K. F. Fischbach, W. J. Gehring, H.G. de Couet. 2002. HOX genes in the sepiolid squid Euprymna scolopes: implications for the evolution of complex body plans. Proc. Natl. Acad. Sci. U S A, 99(4):2088-93.
DeLoney, C. R., T. M. Bartley, K. L. Visick. 2002. Role for phosphoglucomutase in Vibrio fischeri-Euprymna scolopes symbiosis. J. Bacteriol., 184(18):5121-9.
Fidopiastis, P. M., C. M. Miyamoto, M. G. Jobling, E. A. Meighen, E. G. Ruby. 2002. LitR, a new transcriptional activator in Vibrio fischeri, regulates luminescence and symbiotic light organ colonization. Mol. Microbiol., 45(1), 131-143.
Foster, J. S., S. von Boletzky, M. J. McFall-Ngai. 2002. A Comparison of the Light Organ Development of Sepiola robusta naef and Euprymna scolopes berry (CEPHALOPODA: SEPIOLIDAE). Bull. Marine Science, 70(1), 141-153.
Kimbell, J. R., McFall-Ngai, M. J., G. K. Roderick. 2002. Two genetically distinct populations of bobtail squid, Euprymna scolopes, exist on the island of Oahu. Pac. Sci., 56(3):347-355.
Lupp, C., R. E. Hancock, E. G. Ruby. 2002. The Vibrio fischeri sapABCDF locus is required for normal growth, both in culture and in symbiosis. Arch. Microbiol., 179(1), 57-65.
McFall-Ngai, M. J. 2002. Unseen forces: the influence of bacteria on animal development. Dev. Biol., 242(1), 1-14.
Millikan, D. S., E. G. Ruby. 2002. Alterations in Vibrio fischeri motility correlate with a delay in symbiosis initiation and are associated with additional symbiotic colonization defects. Appl. Environ. Microbiol., 68(5), 2519-2528.
Nishiguchi, M. K. 2002. Host-symbiont recognition in the environmentally transmitted sepiolid squid-Vibrio mutualism. Microb. Ecol., 44(1):10-8.
Nyholm, S. V., B. Deplancke, H. R. Gaskins, M. A. Apicella, M. J. McFall-Ngai. 2002. Roles of Vibrio fischeri and nonsymbiotic bacteria in the dynamics of mucus secretion during symbiont colonization of the Euprymna scolopes light organ. Appl. Environ. Microbiol., 68(10), 5113-5122.
Stabb, E. V., E. G. Ruby. 2002. RP4-based plasmids for conjugation between Escherichia coli and members of the Vibrionaceae. Methods Enzymol., 358, 413-426.
Aeckersberg, F., C. Lupp, B. Feliciano, E. G. Ruby. 2001. Vibrio fischeri outer membrane protein OmpU plays a role in normal symbiotic colonization. J. Bacteriol., 183(22), 6590-6597.
McFall-Ngai, M. J. 2001. Identifying 'prime suspects': symbioses and the evolution of multicellularity. Comp. Biochem. Physiol. B. Biochem. Mol. Biol., 129(4), 711-723.
Stabb, E. V., K. A. Reich, E. G. Ruby. 2001. Vibrio fischeri genes hvnA and hvnB encode secreted NAD(+)-glycohydrolases. J. Bacteriol., 183(1), 309-317.
Stabb, E. V., K. L. Visick, D. S. Millikan, A. A. Corcoran, L. Gilson, S. V. Nyholm, M. J. McFall-Ngai, E. G. Ruby. 2001. The Vibrio fischeri-Euprymna scolopes symbiosis: A model marine animal-bacteria interaction. pp. 269-277 In N.K. Saxena (ed.), Recent Advances in Marine Science and Technology, 2000. PACON International, Honolulu, Hawaii.
Timmins, G. S., S. K. Jackson, H. M. Swartz. 2001. The evolution of bioluminescent oxygen consumption as an ancient oxygen detoxification mechanism. J. Mol. Evol., 52(4):321-32.
Visick, K. L., L. M. Skoufos. 2001. Two-component sensor required for normal symbiotic colonization of Euprymna scolopes by Vibrio fischeri. J. Bacteriol., 183(3):835-42.
Callahan, S. M., P. V. Dunlap. 2000. LuxR- and acyl-homoserine-lactone-controlled non-lux genes define a quorum-sensing regulon in Vibrio fischeri. J. Bacteriol., 182(10):2811-22.
Claes, M. F., P. V. Dunlap. 2000. Aposymbiotic culture of the sepiolid squid Euprymna scolopes: role of the symbiotic bacterium Vibrio fischeri in host animal growth, development, and light organ morphogenesis. J. Exp. Zool., 286(3):280-96.
Doino Lemus, J., M. J. McFall-Ngai. 2000. Alterations in the proteome of the Euprymna scolopes light organ in response to symbiotic Vibrio fischeri. Appl. Environ. Microbiol., 66(9), 4091-4097.
Foster, J. S., M. A. Apicella, M. J. McFall-Ngai. 2000. Vibrio fischeri lipopolysaccharide induces developmental apoptosis, but not complete morphogenesis, of the Euprymna scolopes symbiotic light organ. Dev. Biol., 226(2), 242-254.
Graf, J., E. G. Ruby. 2000. Novel effects of a transposon insertion in the Vibrio fischeri glnD gene: defects in iron uptake and symbiotic persistence in addition to nitrogen utilization. Mol. Microbiol., 37(1), 168-179.
Hirsch, A. M., M. J. McFall-Ngai. 2000. Fundamental Concepts in Symbiotic Interactions: Light and Dark, Day and Night, Squid and Legume. Journal of Plant Growth Regulation, 19(2), 113-130.
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Fidopiastis, P. M., H. Sorum, E. G. Ruby. 1999. Cryptic luminescence in the cold-water fish pathogen Vibrio salmonicida. Arch. Microbiol., 171(3), 205-209.
McFall-Ngai, M. J. 1999. Consequences of evolving with bacterial symbionts: Insights from the Squid-Vibrio associations. Annu. Rev. Ecol. Syst., 30:235-56.
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Fidopiastis, P. M., S. von Boletzky, E. G. Ruby. 1998. A new niche for Vibrio logei, the predominant light organ symbiont of squids in the genus Sepiola. J. Bacteriol., 180(1), 59-64.
Foster, J. S., M. J. McFall-Ngai. 1998. Induction of apoptosis by cooperative bacteria in the morphogenesis of host epithelial tissues. Dev. Genes Evol., 208(6), 295-303.
Graf, J., E. G. Ruby. 1998. Host-derived amino acids support the proliferation of symbiotic bacteria. Proc Natl Acad Sci U S A, 95(4), 1818-1822.
Lamarcq, L. H., M. J. McFall-Ngai. 1998. Induction of a gradual, reversible morphogenesis of its host's epithelial brush border by Vibrio fischeri. Infect. Immun., 66(2), 777-785.
McFall-Ngai, M. J. 1998. The Development of Cooperative Associations Between Animals and Bacteria: Establishing Detente Among Domains. American Zoologist, 38(4), 593-608.
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Nishiguchi, M. K., E. G. Ruby, M. J. McFall-Ngai. 1998. Competitive dominance among strains of luminous bacteria provides an unusual form of evidence for parallel evolution in Sepiolid squid-vibrio symbioses. Appl. Environ. Microbiol., 64(9), 3209-3213.
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Visick, K. L., E. G. Ruby. 1998. The periplasmic, group III catalase of Vibrio fischeri is required for normal symbiotic competence and is induced both by oxidative stress and by approach to stationary phase. J. Bacteriol., 180(8), 2087-2092.
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Boettcher, K. J., E. G. Ruby. 1995. Detection and quantification of Vibrio fischeri autoinducer from symbiotic squid light organs. J. Bacteriol., 177(4), 1053-1058.
Doino, J. A., M. J. McFall-Ngai. 1995. A Transient Exposure to Symbiosis-Competent Bacteria Induces Light Organ Morphogenesis in the Host Squid. Bio. Bull., 189:347-355.
Dunlap, P. V., K. Kita-Tsukamoto, J. B. Waterbury, S. M. Callahan. 1995. Isolation of a visibly luminous variant of Vibrio fischeri strain ES114 from the sepiolid squid Euprymna scolopes. Arch. Microbiol., 164:194-202.
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Montgomery, M. K., M. J. McFall-Ngai. 1995. The inductive role of bacterial symbionts in the morphogenesis of a squid light organ. Amer. Zool., 35:372-380.
Boettcher, K. J., E. G. Ruby. 1994. Occurrence of plasmid DNA in the sepiolid squid symbiont Vibrio fischeri. Current Microbiology, 29:279-286.
Graf, J., P. V. Dunlap, E. G. Ruby. 1994. Effect of transposon-induced motility mutations on colonization of the host light organ by Vibrio fischeri. J. Bacteriol., 176(22), 6986-6991.
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Tomarev, S. I., R. D. Zinovieva, V. M. Weis, A. B. Chepelinsky, J. Piatigorsky, M. J. McFall-Ngai. 1993. Abundant mRNAs in the squid light organ encode proteins with a high similarity to mammalian peroxidases. Gene, 132(2), 219-226.
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1977
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